Lab 9: Neural network

Multiple Layer classifier

import matplotlib.pyplot as plt
from sklearn.datasets import fetch_openml
from sklearn.neural_network import MLPClassifier

print(__doc__)

# Load data from https://www.openml.org/d/554
X, y = fetch_openml('mnist_784', version=1, return_X_y=True)
X = X / 255.

# rescale the data, use the traditional train/test split
X_train, X_test = X[:60000], X[60000:]
y_train, y_test = y[:60000], y[60000:]

mlp = MLPClassifier(hidden_layer_sizes=(50,), max_iter=10, alpha=1e-4,
                    solver='sgd', verbose=10, random_state=1,
                    learning_rate_init=.1)

mlp.fit(X_train, y_train)
print("Training set score: %f" % mlp.score(X_train, y_train))
print("Test set score: %f" % mlp.score(X_test, y_test))

fig, axes = plt.subplots(4, 4)
# use global min / max to ensure all weights are shown on the same scale
vmin, vmax = mlp.coefs_[0].min(), mlp.coefs_[0].max()
for coef, ax in zip(mlp.coefs_[0].T, axes.ravel()):
    ax.matshow(coef.reshape(28, 28), cmap=plt.cm.gray, vmin=.5 * vmin,
               vmax=.5 * vmax)
    ax.set_xticks(())
    ax.set_yticks(())

plt.show()

Automatically created module for IPython interactive environment

Iteration 1, loss = 0.32009978

Iteration 2, loss = 0.15347534

Iteration 3, loss = 0.11544755

Iteration 4, loss = 0.09279764

Iteration 5, loss = 0.07889367

Iteration 6, loss = 0.07170497

Iteration 7, loss = 0.06282111

Iteration 8, loss = 0.05530788

Iteration 9, loss = 0.04960484

Iteration 10, loss = 0.04645355

/Users/lliu/Library/Python/3.9/lib/python/site-packages/sklearn/neural_network/_multilayer_perceptron.py:691: ConvergenceWarning: Stochastic Optimizer: Maximum iterations (10) reached and the optimization hasn't converged yet.
  warnings.warn(

Training set score: 0.986800
Test set score: 0.970000

Varying regularization in Multi-layer Perceptron

print(__doc__)

# Author: Issam H. Laradji
# License: BSD 3 clause

import numpy as np
from matplotlib import pyplot as plt
from matplotlib.colors import ListedColormap
from sklearn.model_selection import train_test_split
from sklearn.preprocessing import StandardScaler
from sklearn.datasets import make_moons, make_circles, make_classification
from sklearn.neural_network import MLPClassifier

h = .02  # step size in the mesh

alphas = np.logspace(-5, 3, 5)
names = ['alpha ' + str(i) for i in alphas]

classifiers = []
for i in alphas:
    classifiers.append(MLPClassifier(solver='lbfgs', alpha=i, random_state=1,
                                     hidden_layer_sizes=[100, 100]))

X, y = make_classification(n_features=2, n_redundant=0, n_informative=2,
                           random_state=0, n_clusters_per_class=1)
rng = np.random.RandomState(2)
X += 2 * rng.uniform(size=X.shape)
linearly_separable = (X, y)

datasets = [make_moons(noise=0.3, random_state=0),
            make_circles(noise=0.2, factor=0.5, random_state=1),
            linearly_separable]

figure = plt.figure(figsize=(17, 9))
i = 1
# iterate over datasets
for X, y in datasets:
    # preprocess dataset, split into training and test part
    X = StandardScaler().fit_transform(X)
    X_train, X_test, y_train, y_test = train_test_split(X, y, test_size=.4)

    x_min, x_max = X[:, 0].min() - .5, X[:, 0].max() + .5
    y_min, y_max = X[:, 1].min() - .5, X[:, 1].max() + .5
    xx, yy = np.meshgrid(np.arange(x_min, x_max, h),
                         np.arange(y_min, y_max, h))

    # just plot the dataset first
    cm = plt.cm.RdBu
    cm_bright = ListedColormap(['#FF0000', '#0000FF'])
    ax = plt.subplot(len(datasets), len(classifiers) + 1, i)
    # Plot the training points
    ax.scatter(X_train[:, 0], X_train[:, 1], c=y_train, cmap=cm_bright)
    # and testing points
    ax.scatter(X_test[:, 0], X_test[:, 1], c=y_test, cmap=cm_bright, alpha=0.6)
    ax.set_xlim(xx.min(), xx.max())
    ax.set_ylim(yy.min(), yy.max())
    ax.set_xticks(())
    ax.set_yticks(())
    i += 1

    # iterate over classifiers
    for name, clf in zip(names, classifiers):
        ax = plt.subplot(len(datasets), len(classifiers) + 1, i)
        clf.fit(X_train, y_train)
        score = clf.score(X_test, y_test)

        # Plot the decision boundary. For that, we will assign a color to each
        # point in the mesh [x_min, x_max]x[y_min, y_max].
        if hasattr(clf, "decision_function"):
            Z = clf.decision_function(np.c_[xx.ravel(), yy.ravel()])
        else:
            Z = clf.predict_proba(np.c_[xx.ravel(), yy.ravel()])[:, 1]

        # Put the result into a color plot
        Z = Z.reshape(xx.shape)
        ax.contourf(xx, yy, Z, cmap=cm, alpha=.8)

        # Plot also the training points
        ax.scatter(X_train[:, 0], X_train[:, 1], c=y_train, cmap=cm_bright,
                   edgecolors='black', s=25)
        # and testing points
        ax.scatter(X_test[:, 0], X_test[:, 1], c=y_test, cmap=cm_bright,
                   alpha=0.6, edgecolors='black', s=25)

        ax.set_xlim(xx.min(), xx.max())
        ax.set_ylim(yy.min(), yy.max())
        ax.set_xticks(())
        ax.set_yticks(())
        ax.set_title(name)
        ax.text(xx.max() - .3, yy.min() + .3, ('%.2f' % score).lstrip('0'),
                size=15, horizontalalignment='right')
        i += 1

figure.subplots_adjust(left=.02, right=.98)
plt.show()

Automatically created module for IPython interactive environment

/Users/lliu/Library/Python/3.9/lib/python/site-packages/sklearn/neural_network/_multilayer_perceptron.py:546: ConvergenceWarning: lbfgs failed to converge (status=1):
STOP: TOTAL NO. of ITERATIONS REACHED LIMIT.

Increase the number of iterations (max_iter) or scale the data as shown in:
    https://scikit-learn.org/stable/modules/preprocessing.html
  self.n_iter_ = _check_optimize_result("lbfgs", opt_res, self.max_iter)

/Users/lliu/Library/Python/3.9/lib/python/site-packages/sklearn/neural_network/_multilayer_perceptron.py:546: ConvergenceWarning: lbfgs failed to converge (status=1):
STOP: TOTAL NO. of ITERATIONS REACHED LIMIT.

Increase the number of iterations (max_iter) or scale the data as shown in:
    https://scikit-learn.org/stable/modules/preprocessing.html
  self.n_iter_ = _check_optimize_result("lbfgs", opt_res, self.max_iter)

/Users/lliu/Library/Python/3.9/lib/python/site-packages/sklearn/neural_network/_multilayer_perceptron.py:546: ConvergenceWarning: lbfgs failed to converge (status=1):
STOP: TOTAL NO. of ITERATIONS REACHED LIMIT.

Increase the number of iterations (max_iter) or scale the data as shown in:
    https://scikit-learn.org/stable/modules/preprocessing.html
  self.n_iter_ = _check_optimize_result("lbfgs", opt_res, self.max_iter)

/Users/lliu/Library/Python/3.9/lib/python/site-packages/sklearn/neural_network/_multilayer_perceptron.py:546: ConvergenceWarning: lbfgs failed to converge (status=1):
STOP: TOTAL NO. of ITERATIONS REACHED LIMIT.

Increase the number of iterations (max_iter) or scale the data as shown in:
    https://scikit-learn.org/stable/modules/preprocessing.html
  self.n_iter_ = _check_optimize_result("lbfgs", opt_res, self.max_iter)

/Users/lliu/Library/Python/3.9/lib/python/site-packages/sklearn/neural_network/_multilayer_perceptron.py:546: ConvergenceWarning: lbfgs failed to converge (status=1):
STOP: TOTAL NO. of ITERATIONS REACHED LIMIT.

Increase the number of iterations (max_iter) or scale the data as shown in:
    https://scikit-learn.org/stable/modules/preprocessing.html
  self.n_iter_ = _check_optimize_result("lbfgs", opt_res, self.max_iter)

/Users/lliu/Library/Python/3.9/lib/python/site-packages/sklearn/neural_network/_multilayer_perceptron.py:546: ConvergenceWarning: lbfgs failed to converge (status=1):
STOP: TOTAL NO. of ITERATIONS REACHED LIMIT.

Increase the number of iterations (max_iter) or scale the data as shown in:
    https://scikit-learn.org/stable/modules/preprocessing.html
  self.n_iter_ = _check_optimize_result("lbfgs", opt_res, self.max_iter)